Have a look at my Github for my contributions.

My most recent work is proprietary so can’t share it here but hopefully you will benefit from it every time you drive !

PolyOligo

Design oligos for PCR and PCR-based genotyping (CAPS, KASP, HRM) assays in complex genomes.

patteRNA

Rapid mining of RNA secondary structure motifs from structure profiling data.

RNAprob

Data-directed RNA secondary structure prediction using probabilistic modeling. It uses structure profiling data to constrain structure prediction, and outputs MFE structure and suboptimal structures.